Now delivering · 2-week turnaround

Read your cells
in weeks, not months.

Auperon delivers Van Heron Labs' cellular intelligence platform as a productized service. Send us your data. We deliver a full digital twin, prioritized recommendations, and mechanism-backed insight. Fixed scope. Fixed price. Fixed timeline.

Powered by Van Heron Labs · Backed by
NVIDIA · Microsoft · AWS · HudsonAlpha
Problems we solve

Your cells are trying to tell you something.

Auperon reads what your cells are actually doing — the mechanisms behind the performance you're seeing at the bench. If you're stuck on any of these, we can help.

Bioprocess & Development

"My titer plateaus and I don't know why."

Multi-omic characterization tells you what's actually rate-limiting — from nutrient depletion to stress signatures to metabolic shifts. Not "add more of X" — mechanism-level explanations you can act on.

Cell & Gene Therapy

"My cells lose potency during expansion — and I don't know when or why."

Auperon surfaces early biomarkers of quality loss, stress response signatures, and the specific media components driving them. From MSCs to Tregs to iPSCs, we work with the cell types manufacturing teams actually struggle with.

Chemically-Defined Media

"I need to move from serum to CDM without losing performance."

Serum isn't magic — it's solving multiple problems at once (ion delivery, chelation, solubilization, cofactor "contamination"). We identify what serum was providing that your CDM lacks, so you can replace it with defined components.

Novel & Exploratory Biology

"My cell system is too new for standard tools to say anything useful."

Embryoid models. Novel iPSC differentiation paths. First-of-kind therapeutic modalities. Auperon works from the transcriptome up, so we can surface mechanistic insight on cell systems even when the field has no established playbook.

How it works

Four steps. Weeks, not months.

No sales cycle. No custom contracts. No months of negotiation. Auperon is a productized service — you pick your tier, send your data, and we get to work.

1

Pick your tier

Three transparent tiers priced by conditions analyzed. Iteration included. IP-protected terms at Tier 3.

Same day
2

Send your data

Upload your RNA-seq FASTQs. Detailed prep guidelines on our Science page. Need help with sequencing? We'll route you to a Van Heron Labs full-service engagement.

Days
3

We analyze

Multi-omic characterization, biological digital twin, prioritized recommendations — grounded in the same platform that serves Van Heron Labs' enterprise customers.

2–8 weeks
4

Get results

Full report delivered. Interactive digital twin — continued access. Actionable specifications. Mechanism-level explanation for everything.

On schedule
What you get

A complete cellular intelligence package. Delivered.

Every Auperon project — regardless of tier — includes the same three core deliverables. Higher tiers add depth, iteration support, and integrated specifications for full process optimization.

Deep cellular profile

Full multi-omic characterization of your cell system — expression signatures, metabolic pathways, reactome, function enrichment, lineage diagnosis. Tier 3 adds proteomics and metabolomics.

Interactive digital twin

Your cells as a queryable model — with continued access. Compare conditions, simulate scenarios, test interventions in silico — before you commit anything to the bench.

Prioritized recommendations

Actionable next steps ranked by expected impact — including biomarker candidates and existing-molecule modulator identifications for your cells' actual biology, with mechanism-level explanation for each. Tier 2+ delivers recommendations as specifications with ranges and rationale.

Case studies

Real cells. Real questions. Real answers.

Four case studies from Auperon's platform work across iPSCs, MSCs, Tregs, and novel embryoid models. Different customers, different questions — same mechanism-level approach.

Tier 3 iPSC · HSC yield
4 weeks from sequences delivered

iPSC media optimization for hematopoietic stem cell yield

"How do we optimize our prototype iPSC media to outperform commercial standards — and yield higher-quality HSCs when we later trigger differentiation?"

Why this matters. Generating bona fide, transplantable HSCs from iPSCs remains one of the biggest unsolved problems in regenerative medicine — every mechanism-level optimization at the pre-differentiation stage compounds into the final HSC yield when differentiation is eventually triggered.

What we found

  • The pluripotency circuit was quietly destabilizing — key regulators significantly downregulated; TGF-β signaling under-supported.
  • Cells drifting toward premature differentiation — neural, mesenchymal, and retinoic acid markers elevated in the prototype.
  • Iron overload with oxidative imbalance — ferritin profile substantially elevated, a red flag for downstream HSC yield.
  • ECM signaling impaired — keratan sulfate synthesis downregulated, affecting both structural integrity and growth factor presentation.
  • Metabolic imbalance — hyperglycolytic without proper lipid support, creating an energy flux with nowhere to go.

Impact

  • Mechanism-backed reformulation strategy targeting specific prototype gaps
  • Complete qPCR validation framework ready to deploy
  • Foundation for continued Van Heron Labs co-development engagement

Customer: A leading commercial supplier of human cell products for regenerative medicine and cell therapy applications (repeat Auperon customer).

Tier 2 TIL · Solid tumor manufacturing
3 weeks from sequences delivered

TIL manufacturing for advanced melanoma

"How do we optimize TIL differentiation and shorten our expansion protocol — without sacrificing therapeutic potential — for precision cancer treatment?"

Why this matters. The FDA's 2024 approval of lifileucel (Amtagvi) — the first cellular therapy approved for any solid tumor — validated TIL therapy for advanced melanoma and opened a path forward for other cancers. But the field faces a persistent tension: shorter expansion protocols mean faster patient access and lower manufacturing costs, while longer protocols risk immune exhaustion, dysfunction, and reduced therapeutic potency. Every day cut from a 22-day manufacturing process is meaningful — for cost, for patient wait time, and for the population of patients TIL therapy can practically reach.

What we found

  • Patient/cell lineage-specific profiles — Auperon's multi-omic approach captured how individual patient TIL populations differ mechanistically, opening a path to precision expansion.
  • Over 50 components evaluated and ranked — narrowed to ~25 key nutrients expected to improve viability and expansion.
  • One-carbon metabolism and folate cofactors as rate-limiting for the proliferative demands of TIL expansion.
  • Sphingolipids, glutathione, and redox cofactors for membrane biology, signaling, and oxidative stress management under high-proliferation conditions.
  • Trace elements, polyamines, and novel small molecules for T cell phenotype support during rapid expansion.
  • Nearly all candidates are novel to existing TIL expansion media — targets discoverable only through mechanism-level analysis, not empirical screening.

Impact

  • Path toward shorter TIL expansion protocols without sacrificing therapeutic potential
  • Patient/lineage-specific insights enabling precision cancer therapy manufacturing
  • Foundation for continued Van Heron Labs co-development engagement under IP-protected terms

Customer: A leading cell therapy manufacturing center advancing TIL therapy for solid tumor indications. Commercial partner name protected under confidentiality.

Tier 2 Treg · Autoimmune therapy
1 week from analysis start

Treg cell therapy for ulcerative colitis

"How can multi-omic analysis identify novel media additive candidates that improve viability, expansion, and FOXP3 stability for a cGMP Treg expansion protocol for autologous ulcerative colitis therapy?"

Why this matters. Ulcerative colitis affects millions with debilitating chronic inflammation. Autologous Treg cell therapy represents a promising alternative to lifelong immunosuppression — but the inflammatory milieu of UC specifically downregulates FOXP3 expression, causing Tregs to transdifferentiate into pro-inflammatory effector T cells. Manufacturing a Treg product that maintains stability and function in the gut environment is one of the field's central technical challenges.

What we found

  • Novel growth factor candidates for Treg viability and proliferation — outside the standard IL-2 paradigm.
  • Methylation and one-carbon metabolism cofactors for epigenetic stability supporting FOXP3 maintenance.
  • B and K vitamins, FMN, and cofactors as rate-limiting for the metabolic demands of expansion.
  • Non-proteinogenic amino acids, unique fatty acids, and lipids with mechanistic rationale for Treg biology.
  • Butyrate and short-chain fatty acid metabolites with direct relevance to gut Treg biology.
  • Specific trace elements and nucleotide metabolic modulators for redox support and sustained proliferation.
  • Nearly all candidates are novel to existing Treg expansion formulations — not incremental improvements to what the field already uses.

Impact

  • cGMP-relevant specifications ready for regulatory-compliant media development
  • Direct contribution to FOXP3 stability strategy in UC-specific context
  • Novel component discovery — targets outside the standard IL-2 / TGF-β / anti-CD3/CD28 paradigm

Study type: BD-driven Auperon Tier 2 workflow — we ran this analysis on our own capital to demonstrate what mechanism-level insight could contribute to leading Treg cell therapy programs pursuing UC-specific applications.

Tier 2 MSC · CDM transition
3 weeks from sequences delivered

MSC media optimization for cell therapy applications

"How do we optimize our chemically-defined MSC media to match the performance of our serum-containing formulation — and eliminate vacuole formation in a variant showing this issue?"

Why this matters. MSC therapies span 850+ clinical trials in regenerative medicine, but the industry's shift from serum-containing to chemically-defined media remains a critical bottleneck for clinical translation and cost — and figuring out what serum was actually providing that CDM lacked is a mechanism-level question, not an empirical screening one.

What we found

  • Serum wasn't just protein — it was solving ion delivery, chelation, solubilization, and cofactor "contamination" simultaneously.
  • Vacuole formation had a clear mechanistic driver — oxidative stress signatures combined with dysregulated calcium handling.
  • Premature differentiation signatures — nerve-, bone-, and cartilage-associated — invisible in bulk performance data but detectable at the transcriptomic level.
  • Dozens of specific components across 16 categories identified as critical for closing the CDM performance gap.

Impact

  • Reformulation pathway to serum-free CDM performance
  • Mechanism-backed root cause for vacuole formation
  • Foundation for improved next-generation CDM as a differentiated product

Customer: A leading commercial supplier of human MSCs for cell therapy applications.

See all case studies →
Category positioning

What Auperon isn't.

A lot of things try to solve cellular characterization. Here's how Auperon differs from what you might already be using.

Not a bioinformatics contract shop.

Auperon is a productized cellular intelligence platform. Fixed tiers, fixed timelines, mechanism-level output — not per-hour billing or open-ended engagements.

Not a black-box AI tool.

Auperon is mechanism-transparent. Every recommendation comes with biology-level explanation. You know what's driving the insight and can defend it internally.

Not a slow-services engagement.

Auperon is the productized entry point to Van Heron Labs' cellular intelligence platform. Same rigor, same team, same platform — designed for teams who need answers in weeks, not quarters.

Not a shop designing new molecules for you to qualify.

Auperon is biology-first. We surface what your cells already need — existing molecules, characterized components, mechanism-level insight. Novel IP in the analysis and identifications you take with you. No new chemistry to qualify or clear.

Pricing

Three tiers. Discovery starts at $9,900.

Fixed scope. Fixed price. Fixed timeline. Iteration included. Novel IP in your analysis and identifications — using existing, characterized components. IP-protected terms at Tier 3 for teams ready to co-develop with Van Heron Labs.

Same platform. Same team. Same rigor. Just faster to start.

Auperon is the productized entry point to Van Heron Labs' cellular intelligence platform — designed for teams who need answers in weeks, not quarters. When your work is ready for exclusive formulations, deeper co-development, or IP-protected engagement, Van Heron Labs is the natural next step.